PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6DL_67FD04DA0.1
Common NameMYB73
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 70aa    MW: 8117.29 Da    PI: 10.5973
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6DL_67FD04DA0.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.62.5e-073282348
                           -HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                           +W++ ++  g+ R++k+c++rw +yl
  Traes_6DL_67FD04DA0.1  3 NWRALPKQAGLLRCGKSCRLRWINYL 28
                           7*********99************97 PP

2Myb_DNA-binding47.44.3e-153470139
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39
                           rg++T eE+e +++++++lG++ W+tIa++++ gRt+++
  Traes_6DL_67FD04DA0.1 34 RGNFTSEEEEAIIQLHAMLGNR-WSTIAARLP-GRTDNE 70
                           89********************.*********.****96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.249128IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.3E-15241IPR009057Homeodomain-like
PfamPF002492.0E-5328IPR001005SANT/Myb domain
SuperFamilySSF466894.02E-181569IPR009057Homeodomain-like
PROSITE profilePS5129422.0822970IPR017930Myb domain
SMARTSM007170.00113370IPR001005SANT/Myb domain
PfamPF002498.1E-133470IPR001005SANT/Myb domain
CDDcd001674.27E-83670No hitNo description
Gene3DG3DSA:1.10.10.601.0E-164270IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
HSNWRALPKQ AGLLRCGKSC RLRWINYLRP DIKRGNFTSE EEEAIIQLHA MLGNRWSTIA  60
ARLPGRTDNE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A7e-1715694094B-MYB
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN9690511e-114JN969051.1 Triticum aestivum MYB73 (MYB73) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003575391.12e-44PREDICTED: myb-related protein Myb4-like
SwissprotQ7XBH42e-41MYB4_ORYSJ; Myb-related protein Myb4
TrEMBLG9JVI12e-46G9JVI1_WHEAT; MYB73
STRINGMLOC_34646.13e-45(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.13e-43myb domain protein 15
Publications ? help Back to Top
  1. He Y, et al.
    Ectopic expression of a wheat MYB transcription factor gene, TaMYB73, improves salinity stress tolerance in Arabidopsis thaliana.
    J. Exp. Bot., 2012. 63(3): p. 1511-22
    [PMID:22140235]